Logo proposal for rust-bio

A list of resources and inititive to help the Ukraine

ChIP-seq peak-calling, QC and differential analysis pipeline (Snakemake port of the nextflow pipeline at https://nf-co.re/chipseq).

A Github action for running a Snakemake workflow

A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.

This is the development home of the workflow management system Snakemake. For general information, see

Utilities for building and managing bioconda recipes

Conda recipes for the bioconda channel.

A library of common biomedical types.

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

A set of command line utilities based on Rust-Bio.

Rust userland library for Tock

Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

Various functions for working with the Banker's Sequence in a variety of languages

Various media related scripts