Rebuild for libprotobuf 4.25.1

[regro-cf-autotick-bot]

This PR has been triggered in an effort to update libprotobuf4251.

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[conda-forge-webservices]

Hi! This is the friendly automated conda-forge-linting service.

I just wanted to let you know that I linted all conda-recipes in your PR (recipe) and found it was in an excellent condition.

[hmaarrfk]

I've started to attempt to build linux (all variants). @xhochy are you able to try to build osx?

[hmaarrfk]

sorry i jumped on this too soon. this needs bazel which needs
conda-forge/grpc_java_plugin-feedstock#77

[hmaarrfk]

build_artifacts/linux_64_c_compiler_version12cuda_compiler_version12.0cxx_compiler_version12numpy1.22python3.10.____cpython-log.txt

# Configuration: 05589994264a0a98ef13eb319f22ab690b1c7378d358149ffda9fd6f64359d80
# Execution platform: @local_execution_config_platform//:platform
/home/conda/feedstock_root/build_artifacts/tensorflow-split_1706810202515/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/include/google/protobuf/map_field.h:682:1: error: conflicting declaration 'google::protobuf::internal::MapFieldBase::VTable google::protobuf::internal::MapField<Derived, Key, T, key_wire_type, value_wire_type>::kVTable'
  682 |     MapField<Derived, Key, T, kKeyFieldType_, kValueFieldType_>::kVTable =
      | ^   ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/conda/feedstock_root/build_artifacts/tensorflow-split_1706810202515/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_plac/include/google/protobuf/map_field.h:671:45: note: previous declaration as 'const google::protobuf::internal::MapFieldBase::VTable google::protobuf::internal::MapField<Derived, Key, T, key_wire_type, value_wire_type>::kVTable'
  671 |   static const MapFieldBase::VTable kVTable;
      |                                             ^      
INFO: Elapsed time: 689.017s, Critical Path: 270.85s

linux_64_c_compiler_version12cuda_compiler_version12.0cxx_compiler_version12numpy1.22python3.10.____cpython-log.txt

[hmaarrfk]

It seems that the discussion in conda-forge/gazebo-feedstock#201

and the suggested fix: protocolbuffers/protobuf@bb4718c is helping

[hmaarrfk]

Even with "fixing" libprotobuf, we still fail with the build with:

[16,995 / 28,129] 32 actions, 20 running
[16,995 / 28,129] 32 actions, 21 running
ERROR: /home/conda/feedstock_root/build_artifacts/debug_1706841931849/work/tensorflow/compiler/tf2xla/cc/BUILD:10:21: Executing genrule //tensorflow/compiler/tf2xla/cc:xla_ops_gen_genrule fa
iled: (Exit 127): bash failed: error executing command (from target //tensorflow/compiler/tf2xla/cc:xla_ops_gen_genrule)
  (cd /home/conda/feedstock_root/build_artifacts/debug_1706841931849/_build_env/share/bazel/f16ca41df86c180677b057e9271b19b7/execroot/org_tensorflow && \
  exec env - \
    CUDNN_INSTALL_PATH=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env \
    GCC_HOST_COMPILER_PATH=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_build_env/bin/x86_64-conda-linux-gnu-gcc \
    NCCL_INSTALL_PATH=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env \
    PATH=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/work:/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_build_env/bin:/home/conda/feedstock_root/build_ar
tifacts/debug_1706841931849/_build_env/bin:/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env/bin:/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env/bin
:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin \
    PYTHON_BIN_PATH=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env/bin/python \
    PYTHON_LIB_PATH=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env/lib/python3.10/site-packages \
    TF2_BEHAVIOR=1 \
    TF_CUDA_COMPUTE_CAPABILITIES=sm_60,sm_70,sm_75,sm_80,sm_86,sm_89,sm_90,compute_90 \
    TF_CUDA_PATHS=/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_build_env/targets/x86_64-linux,/home/conda/feedstock_root/build_artifacts/debug_1706841931849/_h_env/targets
/x86_64-linux \
    TF_CUDA_VERSION=12.0 \
    TF_CUDNN_VERSION=8 \
    TF_NCCL_VERSION=2.19 \
    TF_SYSTEM_LIBS=astor_archive,astunparse_archive,boringssl,com_github_googlecloudplatform_google_cloud_cpp,com_github_grpc_grpc,com_google_absl,com_google_protobuf,curl,cython,dill_archiv
e,flatbuffers,gast_archive,gif,icu,libjpeg_turbo,org_sqlite,png,pybind11,snappy,zlib \
  /bin/bash -c 'source external/bazel_tools/tools/genrule/genrule-setup.sh; bazel-out/k8-opt-exec-50AE0418/bin/tensorflow/compiler/tf2xla/cc/ops/xla_ops_gen_cc bazel-out/k8-opt/bin/tensorflo
w/compiler/tf2xla/cc/ops/xla_ops.h bazel-out/k8-opt/bin/tensorflow/compiler/tf2xla/cc/ops/xla_ops.cc 0 ,')
# Configuration: 04af7348d9f57670bca9a21f9bc81efc2a21a13a3a3ffb065ec8dc4e49939bfe
# Execution platform: @local_execution_config_platform//:platform
bazel-out/k8-opt-exec-50AE0418/bin/tensorflow/compiler/tf2xla/cc/ops/xla_ops_gen_cc: symbol lookup error: /home/conda/feedstock_root/build_artifacts/debug_1706841931849/_build_env/share/baze
l/f16ca41df86c180677b057e9271b19b7/execroot/org_tensorflow/bazel-out/k8-opt-exec-50AE0418/bin/tensorflow/compiler/tf2xla/cc/ops/../../../../../_solib_k8/_U_S_Stensorflow_Scompiler_Stf2xla_Sc
c_Cops_Sxla_Uops_Ugen_Ucc___Utensorflow/libtensorflow_framework.so.2: undefined symbol: _ZN7riegeli15RecordsMetadata5ClearEv
INFO: Elapsed time: 4420.909s, Critical Path: 474.97s
INFO: 18603 processes: 3839 internal, 14764 local.
FAILED: Build did NOT complete successfully

[h-vetinari]

Key part here being:

libtensorflow_framework.so.2: undefined symbol: _ZN7riegeli15RecordsMetadata5ClearEv
                                                    ^^^^^^^
                                                    look here

This is vendored by tensorflow here, coming from https://github.com/google/riegeli originally. I see that tensorflow applies a patch to riegeli (and by building through bazel, we should be doing the same), but it doesn't look particularly related.

[hmaarrfk]

Thanks!! I need to presently (for the next few hours) focus on other things. Glad others (like yourself!!!) are able to help while before I completely delete the logs. Even having hidden tmux panes makes me stressed…..

[h-vetinari]

Do you want me to hold off with merging libprotobuf v25.2 until we've fixed tensorflow (in case we need more patches to v25.1)?

Otherwise I'm planning to go ahead and trigger a bigger migration (abseil/grpc/protobuf).

[hmaarrfk]

Go for it.

[h-vetinari]

There's now a PR for a newer protobuf version: #372; if we're lucky the error has been resolved?