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A DSL for data-driven computational pipelines

Groovy 2,884 670 Updated Mar 20, 2025

Calling star alleles in highly polymorphic pharmacogenes (e.g. CYP450 genes) by leveraging genome graph-based variant detection.

Python 32 7 Updated Feb 12, 2025

Population-scale genotyping using pangenome graphs

C++ 179 20 Updated Jan 9, 2025

Structural Variant Index

C 72 4 Updated Dec 13, 2024

A tool to extract LOH blocks from VCF, BAM and FASTA data

Python 21 3 Updated Aug 30, 2024
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