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107 Open 51 Closed
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Issues list

Does QCDPB normalization in EPICv2 process samples individually or jointly when using an sdf list?
#202 opened Mar 24, 2025 by fjgalvezcnic
Is there a command to directly connect to the existing ExperimentHub?
#201 opened Mar 14, 2025 by mynamezyl
The criteria of the DMR
#200 opened Mar 10, 2025 by Moana96
Is sesameData_getGenesByProbes() existing?
#199 opened Mar 9, 2025 by qslin
recommended Prep Code for MSA arrays
#198 opened Mar 5, 2025 by claus-h-g
Where to get further annotation of KYCG DBs, e.g. what does metagene "-5" mean?
#197 opened Feb 27, 2025 by jdreyf
cnSegmentation() Error - colnames missing
#195 opened Jan 27, 2025 by cewim
imputeBetas does not work for example EPICv2 data (sesame 1.24.0)
#194 opened Jan 14, 2025 by dwuab
2
DML models betas using lm() but shouldn't it use glm(family = "binomial") or model M-values?
#192 opened Dec 19, 2024 by jdreyf
3
openSesame BiocParallel error
#191 opened Dec 4, 2024 by krishnakanch
Error in openSesame()
#184 opened Oct 16, 2024 by RosyGH
5
error with predictAge()
#183 opened Oct 8, 2024 by stro0070
Odd behavior with two variables
#180 opened Sep 12, 2024 by nick-webster
Bug in sesameQC_plotBar(qcs, keys = NULL)
#177 opened Sep 6, 2024 by qslin
Missing Control Probes
#176 opened Aug 23, 2024 by nanabgh1
8
BiocParallel errors in SeSaMe during DML calculation
#175 opened Aug 6, 2024 by TPlatek
EPIC.1.LNCaP missing from sesameData.
#174 opened Jul 26, 2024 by simonjuleseric2
3
Missing EPICv2.8.SigDF (EH8554) in sesameData
#172 opened Jul 5, 2024 by egirard1
1
Age prediction
#171 opened Jun 26, 2024 by cbakoo
sesame/sesamize Error: could not find function "pkgTest"
#170 opened Jun 11, 2024 by altuda
Help with running the pipeline directly on beta matrix from TCGA
#169 opened Jun 6, 2024 by pallavisurana1
Can beta values be normalized for random effects?
#168 opened May 24, 2024 by ChromPerson
Error in SesameDataCache()
#164 opened May 14, 2024 by arualemsti
6
Error in normalize.quantiles.use.target(matrix(IR1), as.vector(IG0)) : ERROR; return code from pthread_create() is 22
#163 opened May 10, 2024 by OberhammerF
2
sesameDataGet("KYCG.HM450.Mask.20220123")$recommended has NA value
#162 opened May 9, 2024 by maximilian-leitheiser
1
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