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1. BINge BINge Public

   Clusters de novo transcripts using a reference genome to provide gene-level counts

   Python 5

2. psQTL psQTL Public

   QTL prediction for segregating populations using per-sample sequencing

   Python

3. Genome_analysis_scripts Genome_analysis_scripts Public

   Scripts used for various genomic analyses, including assembly and annotation

   Python 8 5

4. Various_scripts Various_scripts Public

   Repository for scripts with non-specific purpose

   Python 2

5. orf-finder-py orf-finder-py Public

   Python script utilised for identifying open reading frames in a study of Calliactis polypus regeneration

   Python 5 5

6. deGRIT deGRIT Public

   DEtection and Genomic Rectification of Indels using Transcripts

   Python 1