Skip to content

Pull requests: vgteam/vcflib

New pull request New
Clear current search query, filters, and sorts
1 Open 23 Closed
1 Open 23 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Update with upstream changes and our changes to work with them
#24 by adamnovak was merged Apr 24, 2023
dont assume lowercase means symbolic
#22 by glennhickey was merged May 9, 2019
1
Sync vcflib/vcflib development into vgteam/vcflib
#21 by adamnovak was merged Feb 12, 2019
Allow const strings as inputs to variant accessor functions
#20 by adamnovak was merged Oct 23, 2018
Reset the canonical flag when a variant is parsed
#19 by adamnovak was merged Oct 18, 2018
Tolerate a lower-case reference
#18 by adamnovak was merged Oct 18, 2018
More SVLEN/END improvements
#17 by adamnovak was merged Oct 12, 2018
Fix SVLEN and END semantics
#16 by adamnovak was merged Oct 12, 2018
Replace misnamed getMaxReferenceLength with a function that returns a position
#15 by adamnovak was merged Oct 11, 2018
Implement a correct reverse complement in terms of strings
#14 by adamnovak was merged Oct 11, 2018
add checks for std::stol() to prevent std::invalid_argument
#13 by eldariont was merged Oct 8, 2018
2
Add recursive clean for all the submodules
#12 by adamnovak was merged Oct 2, 2018
Add missing *
#11 by adamnovak was merged Sep 17, 2018
Allow htslib to be overridden by the environment
#10 by adamnovak was merged Aug 3, 2018
Canonicalize
#9 by edawson was merged Jun 26, 2018
Fix off-by-1 in SV size check
#8 by adamnovak was merged Jun 14, 2018
Don't assume we have multiple SVTYPE entries
#7 by adamnovak was merged Jun 14, 2018
Don't dump deletion data
#6 by adamnovak was merged Jun 14, 2018
Fix reaching ends of functions without returning
#5 by adamnovak was merged Jun 14, 2018
Safe sv functions
#4 by edawson was merged May 29, 2018
Swap tabixpps
#3 by edawson was merged Aug 1, 2017
Make SVLEN positive for deletions
#2 by edawson was merged Aug 1, 2017
Added lib lzma and bzip2 linking flags (existing master PR)
#1 by edawson was merged Aug 1, 2017
ProTip! Updated in the last three days: updated:>2025-03-19.