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unexpected results with shade when stacking different angles and directions with large file #1452
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Can be achieved increasing memory in |
Thanks @chris-english ! So modifying the I think I will leave it to the developer team to close the issue if they see fit or whenever they address some of these suggestions! cheers! |
Sorry for the long response time. I have updated the manual (warning about disagg) and I have made the method more memory safe. |
# Version 1.8-15 ## Bug Fixes - `Readrds` Failed For Rasters With Timestep="Seconds" [#1711](Https://Github.Com/Rspatial/terra/issues/1711) by Pascal Oettli - `divide<SpatVector>` always returned NULL [#1724](rspatial/terra#1724) by Márcia Barbosa - `erase` failed in some cases [#1710](rspatial/terra#1710) by erkent-carb ## enhancements - `bestMatch` now has argument "fun" to allow the use of different distance measures, and a <matrix> method - `wrap` (and `writeRDS`) now captures varnames/longnames [#1719](rspatial/terra#1719) by Andrew Gene Brown - improved raster metadata writing [#1714](rspatial/terra#1714) by Andrew Gene Brown - `vect` and `writeVector` now properly read and write date and datetime data. [#1718](rspatial/terra#1718) by Andrew Gene Brown - improved estimate of available memory on linux systems [#1506](rspatial/terra#1506) by Cedric Rossi # version 1.8-10 Released 2025-01-13 ## bug fixes - `expanse<SpatRaster>(transform=TRUE)` crashed R when the crs was "local". [#1671](rspatial/terra#1671) by Michael Chirico - `patches(values=TRUE)` wrapped around the edges [#1675](rspatial/terra#1675) by Michael Chirico - `spin` now correctly handles spherical coordinates [#1576](rspatial/terra#1576) by jeanlobry - `mosaic` sometimes crashed R [#1524](rspatial/terra#1524) by John Baums, Dave Klinges, and Hugh Graham. - `spatSample` ignored argument "exp" when taking a random sample with na.rm=TRUE on a large raster [#1437](rspatial/terra#1437) by Babak Naimi - `split<SpatVector,SpatVector>` did not work properly [#1619](rspatial/terra#1619) by Michael Sumner - `autocor` improved handling of NA cells for global Moran computation [#1992](rspatial/terra#1592) by Nicholas Berryman - `shade` is more memory-safe. [#1452](rspatial/terra#1452) by Francis van Oordt and Chris English - fixed bug in `rasterize` revealed when using `crop(mask=TRUE)` [#1686](rspatial/terra#1686) by edixon1 - fixed `to_id = NA` bug in `nearest` [#1471](rspatial/terra#1471) by Mats Blomqvist - better handling of date/unit [#1684](rspatial/terra#1684) and [#1688](rspatial/terra#1688) by Andrew Gene Brown - `spatSample(method="regular")` on a raster with one column returned too many samples [#1362](rspatial/terra#1362) by Daniel R Schlaepfer ## enhancements - `plot<SpatVector>` now uses the same default viridis color palette as `plot<SpatRaster>` [#1670](rspatial/terra#1670) by Márcia Barbosa - `relate` now accepts relation="equals" [#1672](rspatial/terra#1672) by Krzysztof Dyba - `init` now accepts additional arguments for function "fun" - better handling of the 32 connections limitation set by the HDF4 library [#1481](rspatial/terra#1481) by Dimitri Falk - When using RStudio a once per session warning is given when using draw, sel or click [#1063](rspatial/terra#1063) by Sergei Kharchenko - `distance<SpatRaster>` from lon and lat lines/polygons computes distance to the edges instead of the nodes [#1462](rspatial/terra#1462) by Derek Friend - `distance<SpatVector,SpatVector>` now works for lon/lat data [#1615](rspatial/terra#1615) by Wencheng Lau-Medrano - using overviews for faster plotting of COGs over http [#1353](rspatial/terra#1353) by Michael Sumner and [#1412](rspatial/terra#1412); and argument `plot(x, overview=)` to change the default behavior. - `extract` with points is now faster for rasters accessed over http [#1504](rspatial/terra#1504) by Krzysztof Dyba - `extract` with many points on very large rasters was slower in compared to doing the same with "raster" (which uses terra for that!) [#1584](rspatial/terra#1584) by Hassan Masoomi - `merge` now has three alternative algorithms [1366](rspatial/terra#1366) by Hassan Masoomi and [#1650](rspatial/terra#1650) by Agustin Lobo ## new - `$<SpatRaster>` can now be used to get a categorical SpatRaster with a different active category - `scale_linear<SpatRaster>` method for linear scaling of cell values between a minimum and maximum value such as 0 and 1 - `distance` and related methods get argument "method" to choose the distance algorithm for lon/lat data [#1677](rspatial/terra#1677) by Márcia Barbosa - `divide<SpatRaster>` and `divide<SpatVector>` methods - `nseg` counts the number of segments in a SpatVector [#1647](rspatial/terra#1674) by Michael Chirico - `extract` argument "search_radius" to extract values from the nearest raster cell that is not `NA` [#873](rspatial/terra#873) by matthewseanmarcus - `combineLevels` to combine the levels of all layers [link](https://stackoverflow.com/questions/79340152/how-to-set-factor-levels-in-a-rast-stack-using-terra-when-different-levels-exi) on SO by Sam
I am having issues with the example code for the
shade
function interra
when using a larger raster and attempting the stacked example of angles and directions. . It seems the function does run but the produced object has no layers (as expected from the stacked shade angles).We have been trying to figure out the issue in this stackoverflow questions:
https://stackoverflow.com/questions/78116098/terra-shade-function-not-stacking-different-angles-and-directions-with-my-own-da?noredirect=1#comment137741126_78116098
Coming to the conclusion that it is a memory issue that breaks the function internally and no error is reported. Also, when attempting to produce 4 individual shades, and averaging them, it works (with my data).
This is a reproducible example, with a different map from the stackoverflow (so I don't have to paste the link here) but its producing the same results in my computer:
The previous output works fine. But the following just runs
h
but produces either two things:Output with bug:
A raster with some more resolution, may produce zero layer but an SpatRaster with dimensions, resolution, extent, but no min or max values.
I tried just producing the individual shades, and getting a mean via
terra::app()
which seemed to work.A secondary issue, was that when looking
But when I looked into the example in the documentation, using my "optional method", the average products seem different (just checking the min and max values of the mean output rasters), which Chris mentioned in the SO question that should not be the case.
Original h object from the documentation example (grouped shading)
meanh
class : SpatRaster
dimensions : 900, 950, 1 (nrow, ncol, nlyr)
resolution : 0.0008333333, 0.0008333333 (x, y)
extent : 5.741667, 6.533333, 49.44167, 50.19167 (xmin, xmax, ymin, ymax)
coord. ref. : lon/lat WGS 84 (EPSG:4326)
source(s) : memory
name : mean
min value : 0.6748505
max value : 0.8538219
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