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@populationgenomics

Centre for Population Genomics

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  1. talos talos Public

    Rare Disease variant reanalysis tool

    Python 8 4

  2. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 7 1

  3. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 6

  5. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 4 1

  6. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

Repositories

Showing 10 of 74 repositories
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 7 MIT 1 48 (1 issue needs help) 37 Updated Mar 21, 2025
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 2 2 15 Updated Mar 21, 2025
  • gnomad-browser Public Forked from broadinstitute/gnomad-browser

    Explore gnomAD datasets on the web

    populationgenomics/gnomad-browser’s past year of commit activity
    TypeScript 0 MIT 48 0 1 Updated Mar 21, 2025
  • hail Public Forked from hail-is/hail

    Scalable genomic data analysis.

    populationgenomics/hail’s past year of commit activity
    Python 1 MIT 251 3 2 Updated Mar 21, 2025
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 3 MIT 2 44 21 Updated Mar 20, 2025
  • analysis-runner Public
    populationgenomics/analysis-runner’s past year of commit activity
    Python 2 MIT 4 9 (2 issues need help) 5 Updated Mar 20, 2025
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 8 MIT 4 13 5 Updated Mar 20, 2025
  • cpg-flow-gcnv Public

    CPG-Flow implementation of the CPG gCNV Exome SV calling workflow

    populationgenomics/cpg-flow-gcnv’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Mar 20, 2025
  • cpg-flow-exomiser Public

    CPG-Flow implementation of the CPG Exomiser workflow

    populationgenomics/cpg-flow-exomiser’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Mar 20, 2025
  • cpg-flow-pipeline-template Public template

    A template repository to use as a base for CPG workflows using the cpg-flow pipeline framework

    populationgenomics/cpg-flow-pipeline-template’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 19, 2025
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