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@metagenome-atlas

metagenome-atlas

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  1. atlas Public

    ATLAS - Three commands to start analyzing your metagenome data

    Python 384 100

  2. Tutorial Public

    A tutorial for Metagenome-Atlas

    MAXScript 23 13

Repositories

Showing 10 of 30 repositories
  • atlas Public

    ATLAS - Three commands to start analyzing your metagenome data

    Python 384 BSD-3-Clause 100 10 8 Updated Mar 20, 2025
  • metagenome-assembly Public

    Workflow module for metagenome assembly

    Python 2 MIT 0 0 0 Updated Jun 25, 2024
  • snakemake-wrappers Public Forked from snakemake/snakemake-wrappers

    This is the development home of the Snakemake wrapper repository, see

    CAP CDS 0 192 0 1 Updated Jan 15, 2024
  • Tutorial Public

    A tutorial for Metagenome-Atlas

    MAXScript 23 GPL-3.0 13 4 2 Updated Nov 24, 2023
  • genecatalog_atlas Public

    Extended genecatalog workflow for metagenome-atlas

    Python 1 MIT 0 0 0 Updated Sep 27, 2023
  • genome-annotator Public
    Python 3 MIT 0 1 0 Updated Sep 27, 2023
  • supp_data_atlas Public

    Supplementary data for Atlas manuscript

    Jupyter Notebook 1 1 0 0 Updated Sep 27, 2023
  • plasmid_atlas Public
    Python 1 MIT 0 0 0 Updated Sep 27, 2023
  • kingfisher_workflow Public Forked from trickovicmatija/kingfisher_workflow

    This is a workflow that allows you to download whole projects and metadata with kingfisher. Additionally, it takes care about merging same samples together.

    Python 0 MIT 1 0 0 Updated Aug 31, 2023
  • snake_gtdbtk Public

    A snakemake for GTDB-tk

    Python 5 1 0 0 Updated Aug 31, 2023
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