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Achievement: Pull Sharkx2

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Achievement: Pull Sharkx2

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  1. SARS-COV-2_COLLECTIVE_ANALYSIS SARS-COV-2_COLLECTIVE_ANALYSIS Public

    We previously developed a program in python3 that flags possible lab-associated variants in SARS-CoV-2 data (see https://github.com/lgozasht/COVID-19-Lab-Specific-Bias-Filter). This repository host…

    Python 5

  2. Genomic-Ambiguity Genomic-Ambiguity Public

    Python

  3. yatisht/usher yatisht/usher Public

    Ultrafast Sample Placement on Existing Trees

    C++ 124 42

  4. Fasta2UShER Fasta2UShER Public

    We provide a tool, Fasta2UShER.py, that converts SARS-CoV-2 genomic data in fasta format into a merged VCF viable for input to UShER (see https://github.com/yatisht/usher ). Fasta2UShER.py can take…

    Python 2

  5. ProblematicSites_SARS-CoV2 ProblematicSites_SARS-CoV2 Public

    Forked from W-L/ProblematicSites_SARS-CoV2

    Python

  6. Introner-elements Introner-elements Public

    Python 2 1