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hisplan Follow

Overview Repositories 148 Projects 0 Packages 0 Stars 32

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hisplan

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Jaeyoung Chun hisplan

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Assistant Professor / School of Applied Artificial Intelligence @ Handong, Computational Biologist @ Single Cell Research Initiative / Dana Pe'er Lab

40 followers · 57 following

Memorial Sloan Kettering Cancer Center
New York, NY
21:36 - 4h behind
hisplan.github.io

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Overview Repositories 148 Projects 0 Packages 0 Stars 32

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Overview
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All Python HTML Jupyter Notebook Shell WDL Dockerfile JavaScript R MATLAB

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Last updated Name Stars

bcd-test Public

Code Management using Git and GitHub

Python Updated Mar 12, 2025
hisplan.github.io Public

Personal Website

HTML Updated Mar 5, 2025
bcd-sandbox Public

빅데이터종합설계 샌드박스

9 Updated Oct 26, 2024
scing Public

SCING: Single-Cell pIpeliNe Garden (pronounced as "sing" /siŋ/)

workflow pipeline single-cell

Python 7 3 MIT License Updated Jul 29, 2024
facamp-2024-summer Public
Forked from ai-5050/facamp-2024-summer

Football Analytics Camp Summer 2024

Jupyter Notebook Updated Jul 16, 2024
docker-cellranger Public

Dockerized Cell Ranger

docker container cell-ranger

Shell 6 3 MIT License Updated May 3, 2024
hello-world Public

Python Updated Mar 6, 2023
tutorial-conda Public

Updated Feb 23, 2023
docker-hello-handong Public

Hello Handong using Docker

Shell Updated Feb 15, 2023
tuning_playbook Public
Forked from google-research/tuning_playbook

A playbook for systematically maximizing the performance of deep learning models.

Other Updated Jan 20, 2023
handong-bio-ai-workshop-2023-01 Public

Handong Bio-AI Workshop Winter 2023

Jupyter Notebook MIT License Updated Jan 13, 2023
bigmac-kiosk-demo Public

Big Mac Kiosk Demo

Python 1 Updated Dec 5, 2022
msk-hpc-utils Public

Utilities for MSK HPC

Python 3 MIT License Updated May 20, 2022
sharp Public

A single-cell demultiplexing pipeline, the sharp (♯)

hashtag cite-seq cell-hashing asap-seq cellplex

Jupyter Notebook 4 1 MIT License Updated May 19, 2022
scing-notebooks Public
Forked from andrewmoorman/scing-notebooks

A collection of Jupyter notebooks which automate the creation of input files for SCING pipelines

Jupyter Notebook MIT License Updated Apr 19, 2022
wdl-cellranger-vdj Public

WDLized Cell Ranger V(D)J

workflow pipeline wdl single-cell cellranger

WDL MIT License Updated Apr 19, 2022
wdl-ArchR Public

WDLized ArchR

workflow pipeline wdl single-cell scatac-seq archr

WDL MIT License Updated Apr 15, 2022
wdl-cellranger-atac Public

WDLized Cell Ranger ATAC

workflow pipeline wdl single-cell cellranger-atac

WDL MIT License Updated Apr 15, 2022
cromwell-gwf-log Public

aws wdl aws-cloudwatch aws-batch cromwell

Python MIT License Updated Apr 15, 2022
docker-cellranger-atac Public

Dockerized Cell Ranger ATAC

docker single-cell cellranger-atac

Shell MIT License Updated Apr 15, 2022
cromwell-gwf-setup Public

Setting up Cromwell + AWS GWF (Genomics Workflows)

gws cromwell

Shell Updated Apr 9, 2022
cromsfer Public

Cromwell Output Transfer

wdl cromwell

Python 1 GNU General Public License v3.0 Updated Mar 30, 2022
wdl-mkref Public

WDLized mkref

WDL MIT License Updated Mar 29, 2022
docker-htslib Public

Dockerized HTSlib (bgzip, htsfile, and tabix utilities)

Dockerfile 1 Updated Mar 29, 2022
docker-bcftools Public

Dockerized bcftools

Dockerfile MIT License Updated Mar 29, 2022
seqc-ada Public

SEQC Ada (AutomateD Analysis)

wdl scrna-seq seqc

Jupyter Notebook Updated Mar 28, 2022
seqc-docker Public

Dockerized SEQC

docker container seqc

Python 1 Updated Mar 26, 2022
seqc-packer Public

This package automates the creation of SEQC AMI (Amazon Machine Image).

packer ami seqc

Shell 1 Updated Mar 26, 2022
seqc Public
Forked from dpeerlab/seqc

Single-Cell Sequencing Quality Control and Processing Software

Python GNU General Public License v2.0 Updated Mar 26, 2022
docker-samtools Public

Dockerized samtools

docker containers samtools

Dockerfile Updated Mar 23, 2022

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