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@hbctraining

Teaching materials at the Harvard Chan Bioinformatics Core

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  1. Intro-to-R-flipped Intro-to-R-flipped Public

    R 80 42

  2. Shell-for-bioinformatics Shell-for-bioinformatics Public

    HTML 42 23

  3. scRNA-seq_online scRNA-seq_online Public

    R 573 194

  4. Intro-to-rnaseq-hpc-salmon-flipped Intro-to-rnaseq-hpc-salmon-flipped Public

    Introduction to bulk RNA-seq

    HTML 105 43

  5. Intro-to-DGE Intro-to-DGE Public

    HTML 192 84

  6. Investigating-chromatin-biology-ChIPseq Investigating-chromatin-biology-ChIPseq Public

    HTML 88 38

Repositories

Showing 10 of 57 repositories
  • Training-modules Public

    Materials for short, half-day workshops

    hbctraining/Training-modules’s past year of commit activity
    Jupyter Notebook 324 150 18 2 Updated Mar 21, 2025
  • Intro-to-DGE Public
    hbctraining/Intro-to-DGE’s past year of commit activity
    HTML 192 84 6 0 Updated Mar 21, 2025
  • main Public template
    hbctraining/main’s past year of commit activity
    SCSS 53 17 0 1 Updated Mar 19, 2025
  • collaborations Public

    Collaborations across campus

    hbctraining/collaborations’s past year of commit activity
    SCSS 0 0 0 0 Updated Mar 17, 2025
  • Pseudobulk-for-scRNAseq Public

    Approaches for looking at differential expression and differential abundance in scRNA-seq

    hbctraining/Pseudobulk-for-scRNAseq’s past year of commit activity
    R 0 CC0-1.0 1 9 1 Updated Mar 14, 2025
  • scRNA-seq_online Public
    hbctraining/scRNA-seq_online’s past year of commit activity
    R 573 194 10 0 Updated Mar 7, 2025
  • spatial_nanocourse Public

    Module for Visium HD analysis for Nanocourse organized by SCC

    hbctraining/spatial_nanocourse’s past year of commit activity
    HTML 1 0 3 0 Updated Feb 26, 2025
  • Accessing_public_genomic_data Public

    Tutorials on accessing public reference and genomic data

    hbctraining/Accessing_public_genomic_data’s past year of commit activity
    HTML 30 16 2 0 Updated Feb 18, 2025
  • Intro-to-R-flipped Public
    hbctraining/Intro-to-R-flipped’s past year of commit activity
    R 80 42 1 0 Updated Feb 14, 2025
  • Intro-to-R-mkdocs Public
    hbctraining/Intro-to-R-mkdocs’s past year of commit activity
    Python 0 1 2 0 Updated Feb 14, 2025
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