Software to graphically display the results of a CAFE analysis (http://sites.bio.indiana.edu/~hahnlab/Programs/CAFE3.0/CAFE_3.0_Manual_Aug1Update.pdf)

Installation

To install from npm:

npm install cafe-vis
cd node_modules/cafe-vis

To install from github

git clone https://github.com/emepyc/cafe-vis
cd cafe-vis
npm install
gulp build-browser

Run

node src/cafe.js test/resultfile.cafe

Then open your browser and go to

http://127.0.0.1/9000

To view the tree of a given family:

http://127.0.0.1/9000/<ID>

Contact

For any comment contact me at [email protected]or [email protected]