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17 Open 61 Closed
17 Open 61 Closed
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Issues list

Ask for an unmatched synthetic normal genome file when calling SNVs with CaVEMan
#118 opened Mar 19, 2025 by zhangzhen
Ask for the download link to VerifyBamID's resource files for GRCh37
#117 opened Mar 10, 2025 by zhangzhen
1
Ask for in-house pipelines to do mutation calling in clonal samples sequenced with standard protocols
#116 opened Mar 10, 2025 by zhangzhen
1
Error : .bam is not properly preprocessed.
#115 opened Mar 9, 2025 by zz311784
6
link error occurred in running ./setup.sh <install_path>
#114 opened Feb 14, 2025 by zhangzhen
1
NextFlow
#112 opened Jan 23, 2025 by MadeleineOman
8
Analyses in organisms possessing ATGC at the end of chromosomes
#107 opened Nov 22, 2024 by toshwatatosh
1
Possible bug in filtering of indels
#96 opened May 9, 2024 by gevro
38
Question about DSC_estimated_error_rates calculation
#92 opened Mar 26, 2024 by gevro
1
Question about mutation results
#91 opened Feb 29, 2024 by shanyfr
1
Repeat run of same sample outputs recurrent indels in different order
#89 opened Feb 11, 2024 by gevro
runNanoSeq.py var and post by NanoSeq 3.5.4 fails for some of samples that NanoSeq 3.5.1 run successfully.
#85 opened Jan 23, 2024 by monagai
2
results.cov.bed.gz last line
#84 opened Jan 17, 2024 by gevro
29
In most samples, INDELs are several times more than SNVs.
#82 opened Jan 2, 2024 by monagai
2
--mc option for runNanoSeq.py indel
#73 opened Oct 26, 2023 by monagai
2
not all reads have the RB tags
#56 opened Dec 20, 2022 by Ding-hang
7
Advice for beginner trying to run this
#46 opened Oct 20, 2022 by bradclass
7
ProTip! Updated in the last three days: updated:>2025-03-24.