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Bittremieux Lab

The Bittremieux Lab at the University of Antwerp

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  1. spectrum_utils spectrum_utils Public

    Python package for efficient mass spectrometry data processing and visualization

    Python 147 26

  2. ANN-SoLo ANN-SoLo Public

    Spectral library searching using approximate nearest neighbor techniques.

    Jupyter Notebook 42 19

  3. falcon falcon Public

    Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.

    Python 27 8

  4. GLEAMS GLEAMS Public

    GLEAMS is a Learned Embedding for Annotating Mass Spectra.

    Python 24 8

  5. MTL-peptide-property-prediction MTL-peptide-property-prediction Public

    All scripts to reproduce the results from the 'Machine learning strategies to tackle data challenges in mass spectrometry-based proteomics' study. Data and pretrained models are available at https:…

    Python 1 1

  6. gnps-rdd gnps-rdd Public

    Forked from global-foodomics/gfop

    Reference data-driven metabolomics using the GNPS platform

    Python

Repositories

Showing 6 of 6 repositories
  • spectrum_utils Public

    Python package for efficient mass spectrometry data processing and visualization

    bittremieux-lab/spectrum_utils’s past year of commit activity
    Python 147 Apache-2.0 26 9 (1 issue needs help) 3 Updated Mar 21, 2025
  • ANN-SoLo Public

    Spectral library searching using approximate nearest neighbor techniques.

    bittremieux-lab/ANN-SoLo’s past year of commit activity
    Jupyter Notebook 42 Apache-2.0 19 19 2 Updated Mar 20, 2025
  • falcon Public

    Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.

    bittremieux-lab/falcon’s past year of commit activity
    Python 27 BSD-3-Clause 8 7 2 Updated Mar 12, 2025
  • gnps-rdd Public Forked from global-foodomics/gfop

    Reference data-driven metabolomics using the GNPS platform

    bittremieux-lab/gnps-rdd’s past year of commit activity
    Python 0 2 3 1 Updated Mar 4, 2025
  • MTL-peptide-property-prediction Public

    All scripts to reproduce the results from the 'Machine learning strategies to tackle data challenges in mass spectrometry-based proteomics' study. Data and pretrained models are available at https://zenodo.org/doi/10.5281/zenodo.11084462

    bittremieux-lab/MTL-peptide-property-prediction’s past year of commit activity
    Python 1 1 0 0 Updated Jul 16, 2024
  • GLEAMS Public

    GLEAMS is a Learned Embedding for Annotating Mass Spectra.

    bittremieux-lab/GLEAMS’s past year of commit activity
    Python 24 BSD-3-Clause 8 2 0 Updated Aug 16, 2023

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