fish550-2025

GitHub Repo for FISH 550 2025 https://atsa-es.github.io/atsa/

Labs

Look in the ReadMe file in the Lab folder. Do your team work in your team folder. Once done, label your final team write-up as Lab-X-team-X_final.Rmd.

• Lab 1
• Lab 2
• Lab 3
• Lab 4
• Lab 5

Building the lab book (for Eli)

Prerequisites

1. Make sure GH Pages is set up to use gh-pages branch

2. Make sure the gh-pages branch exists. You can create on GH

4. Back on RStudio, make sure you are not on the GH branch (locally). Do a Git pull to make sure you have the gh-pages branch locally but don't switch to it.

To update the lab book

Open a terminal and make sure you are in fish550-2025. Run this

quarto publish gh-pages

The first time this is run, it will fail. Do a manual push of the gh-pages branch. After that, the publish command will work.