Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Mar 24 00:56:08 2025	Mon Mar 17 00:57:02 2025
1	Toolset	Mon Mar 24 12:56:43 2025	Mon Mar 17 12:55:55 2025
2	Toolset	Tue Mar 25 00:56:14 2025	Tue Mar 18 00:54:28 2025
3	Toolset	Tue Mar 25 12:54:33 2025	Tue Mar 18 12:55:38 2025
4	Toolset	Wed Mar 26 00:53:56 2025	Wed Mar 19 00:54:32 2025
5	Toolset	Wed Mar 26 12:54:10 2025	Wed Mar 19 12:54:39 2025
6	Toolset	Thu Mar 27 00:54:11 2025	Thu Mar 20 00:53:14 2025
7	Toolset	Thu Mar 27 12:57:20 2025	Thu Mar 20 12:52:57 2025
8	Toolset	Fri Mar 28 00:53:36 2025	Fri Mar 21 00:54:41 2025
9	Toolset	Fri Mar 28 12:54:39 2025	Fri Mar 21 12:53:19 2025
10	Toolset	Sat Mar 29 00:53:57 2025	Sat Mar 22 00:52:21 2025
11	Toolset	Sat Mar 29 12:51:07 2025	Sat Mar 22 12:53:47 2025
12	Toolset	Sun Mar 30 01:00:41 2025	Sun Mar 23 00:58:45 2025
13	Toolset	Sun Mar 23 12:50:35 2025	Sun Mar 16 12:51:02 2025