GitHub - NoamKaplan/dna-triangulation: DNA Triangulation

DNA Triangulation

See wiki for more details.

Name	Name	Last commit message	Last commit date
Latest commit NoamKaplan -ci nargs should be '*' to allow empty input Jul 6, 2015 8944328 · Jul 6, 2015 History 10 Commits
Makefile	Makefile	Initial commit, as submitted to Nature Biotechnology.	Nov 22, 2013
README	README	Initial commit, as submitted to Nature Biotechnology.	Nov 22, 2013
README.md	README.md	Update README.md	Apr 22, 2014
augmentation_chromosome_pred.py	augmentation_chromosome_pred.py	Initial commit, as submitted to Nature Biotechnology.	Nov 22, 2013
augmentation_locus_pred.py	augmentation_locus_pred.py	Initial commit, as submitted to Nature Biotechnology.	Nov 22, 2013
chromosome_scaffold.py	chromosome_scaffold.py	Fix for unsorted input	Jan 18, 2014
contig_orientations.tab	contig_orientations.tab	added contig orientation code	Jun 4, 2014
contig_positions.tab	contig_positions.tab	Initial commit, as submitted to Nature Biotechnology.	Nov 22, 2013
karyotype.py	karyotype.py	-ci nargs should be '*' to allow empty input	Jul 6, 2015
orienting.py	orienting.py	added contig orientation code	Jun 4, 2014
orienting_mods.py	orienting_mods.py	added contig orientation code	Jun 4, 2014
triangulation.py	triangulation.py	change all minimize() to fmin_l_bfgs_b()	Dec 11, 2013

Provide feedback