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@JCVenterInstitute

J. Craig Venter Institute

Popular repositories Loading

  1. NSForest NSForest Public

    A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing

    HTML 60 21

  2. VIGOR4 VIGOR4 Public

    VIGOR4

    Java 19 11

  3. FRmatch FRmatch Public

    Cell type matching in single-cell RNA-sequencing data using FR-Match

    R 19 3

  4. PanGenomePipeline PanGenomePipeline Public

    PanGenomePipeline

    Perl 15 9

  5. OMeta-Public OMeta-Public Public

    OMeta-Public

    JavaScript 8 9

  6. PanACEA PanACEA Public

    PanACEA is a suite of PERL scripts that allows for visualization of prokaryotic pan-chromosomes, including core and variable regions.

    Perl 7 4

Repositories

Showing 10 of 30 repositories
  • NSForest Public

    A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing

    HTML 60 MIT 21 5 0 Updated Mar 21, 2025
  • VIGOR_DB Public

    VIGOR_DB

    Python 3 3 1 0 Updated Mar 20, 2025
  • CAMRA Public

    CAMRA is a DS-I Africa research hub focused on analyzing clinical and molecular data related to antimicrobial resistance (AMR) in bacterial infections in Nigeria and Rwanda with the aim of translating genomics of AMR to sensitive, rapid diagnostics, and effective therapeutics.

    Python 1 0 0 0 Updated Mar 11, 2025
  • HSPW-V3 Public
    JavaScript 0 1 5 0 Updated Jan 15, 2025
  • FRmatch Public

    Cell type matching in single-cell RNA-sequencing data using FR-Match

    R 19 MIT 3 1 0 Updated Oct 9, 2024
  • Jillion Public

    Jillion

    Java 2 LGPL-2.1 4 0 0 Updated Aug 8, 2024
  • DAFi-gating Public
    HTML 6 MIT 3 0 0 Updated Jun 24, 2024
  • celligrate Public

    Software suite for marker gene identification and cell type integration from single cell RNA-sequencing data

    HTML 3 MIT 0 1 0 Updated Jun 7, 2024
  • PanGenomePipeline Public

    PanGenomePipeline

    Perl 15 GPL-2.0 9 7 0 Updated Apr 10, 2024
  • PanACEA Public

    PanACEA is a suite of PERL scripts that allows for visualization of prokaryotic pan-chromosomes, including core and variable regions.

    Perl 7 GPL-2.0 4 1 0 Updated Mar 20, 2024
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