Sebastian Alvis, Shane Grigsby, Lindsey Heagy, Yara Mohajerani, Fernando Pérez
This tutorial is hosted on the Github ICESat-2 HackWeek organization.
Full video (1:21h) recording of this tutorial, as delivered June 12, 2020 for the ICESat-2 Hack week.
- 10:45 - 11:00 AM [Anthony]: Getting connected
- welcome and get everyone connected
- 11:00 - 11:15 AM [Fernando]: JupyterHub, Pangeo and JupyterLab overview
- Basic architecture of our shared computing environment
- Logging in/shutting down
- Explaining shared drive space, what persists, need to push code changes to GitHub
- Overview of the interface
- What are the benefits of using Jupyter Notebooks? Collaboration, open workflows, etc.
- What are the caveats? (e.g. hidden states, need to update intermediate cells)
- 11:15 - 11:25 AM [Yara]: Jupyter Notebooks
- Focus in on JupyterNotebook interface - cells (type, running, editing, copy/pasting), kernel
- What features are specific to notebooks?
- 11:25 - 11:55 AM [Shane]: IPython
- Workflows beyond plain Python - tab completion, command line access, debugging
- 11:55 - 12:20 AM [Fernando]: Widgets
- creating just-in-time research GUIs: connecting interactive controls to your code
- 12:20 - 12:30 AM [Fernando]: Wrap up
Note that for the tutorial during the HackWeek, all necessary dependencies are already installed in the Hub.
https://ipywidgets.readthedocs.io/en/latest/user_install.html
- Login to JupyterHub: https://icesat-2.hackweek.io
- Open a Terminal: Find Terminal icon at the bottom (or click the + sign on the top left)
- Clone GitHub repo (type on the terminal):
git clone https://github.com/ICESAT-2HackWeek/intro-jupyter.git
Post your question in the #questions channel on Slack.
- sharing your notebooks on Binder: https://mybinder.org
- widgets in action for education: https://github.com/geoscixyz/geosci-labs
- dashboarding with voila: https://github.com/voila-dashboards/voila
- building a book with JupyterBook: https://jupyterbook.org
This collection of tutorials was adapted from the ICESat-2 Hackweek tutorial by @fperez. Materials for 2020 were co-developed by the instructor team above.
All code and content in this repository is free software: you can redistribute it and/or modify it under the terms of the BSD License. A copy of this license is provided in LICENSE.
