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HINGE, Oxford Nanopore, E. coli, 23X coverage, almost closed assembly #107

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alimayy opened this issue Apr 3, 2017 · 0 comments
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@alimayy
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alimayy commented Apr 3, 2017

Hi guys,

Just wanted to let you know that last week I used HINGE with low-coverage parameters suggested by Ilan here on 9,567 MinIon reads (min. length 8 Kb), and at 23X coverage I was able to get a full size assembly of 3 contigs (E. coli, 4,4 Mb). This is very promising!

Ali

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