DennisSchmitz
Follow
Stars
Accessible Metagenomics/viromics for public health and clinical domains. Focuses on automation, accessibility and a clear audit trail.
A minimalist tree plotting library using toyplot graphs
Cross-platform software to draw phylogenetic trees
baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development is back on the evogytis/baltic branch (i.e. here).
A Snakemake executor plugin for submitting jobs to a LSF cluster
Turn (almost) any Python command line program into a full GUI application with one line
Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionformatics tools to a user interface. It is usable on all major …
DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm
Iconic font aggregator, collection, & patcher. 3,600+ icons, 50+ patched fonts: Hack, Source Code Pro, more. Glyph collections: Font Awesome, Material Design Icons, Octicons, & more
All Algorithms implemented in Python
Slim(toolkit): Don't change anything in your container image and minify it by up to 30x (and for compiled languages even more) making it secure too! (free and open source)
MMseqs2: ultra fast and sensitive search and clustering suite
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
Streamlit — A faster way to build and share data apps.