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Rust + SIMD
🦀
Rust + SIMD
363 followers · 58 following

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: YOLOAchievement: Starstruckx3Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: YOLOAchievement: Starstruckx3Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Organizations

@OpenMined @haosulab @pairwise-alignment

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Daniel-Liu-c0deb0t/README.md

Greetings, curious internet dweller! 👋

This is the home of most of my code. Take a look around--something may catch your eye!

If you are extraordinarily bold and curious, check out this cool project that has been piquing my interest recently.

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  1. uwu Public

    fastest text uwuifier in the west

    Rust 1.4k 40

  2. block-aligner Public

    SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence or sequence-to-profile alignments using an adaptive block-based algorithm.

    Jupyter Notebook 134 7

  3. google/best Public

    Bam Error Stats Tool (best): analysis of error types in aligned reads.

    Rust 129 11

  4. triple_accel Public

    Rust edit distance routines accelerated using SIMD. Supports fast Hamming, Levenshtein, restricted Damerau-Levenshtein, etc. distance calculations and string search.

    Rust 107 13

  5. UMICollapse Public

    Accelerating the deduplication and collapsing process for reads with Unique Molecular Identifiers (UMI). Heavily optimized for scalability and orders of magnitude faster than a previous tool.

    Java 72 9

  6. cute-nucleotides Public

    Cute tricks for SIMD vectorized binary encoding and decoding of nucleotides, in Rust.

    Rust 118 4

462 contributions in the last year

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Activity overview

Contributed to Daniel-Liu-c0deb0t/dlb-kmer-sampling, Daniel-Liu-c0deb0t/frfr, Daniel-Liu-c0deb0t/ANTISEQUENCE and 6 other repositories
Loading A graph representing Daniel-Liu-c0deb0t's contributions from March 24, 2024 to March 27, 2025. The contributions are 70% commits, 20% code review, 8% pull requests, 2% issues.

Contribution activity

March 2025

38 contributions in private repositories Mar 1 – Mar 26
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