2.5.49

-- ARM NEON fix for likelihood scaling
-- Added features to HBL commands and minor enhancements

2.5.48

Bug fixes, minor enhancements, and some new features.

2.5.47

Code refactoring and some speed improvements.

1. Redid product-sum code for the pruning algorithm to use cache-aware blocking and better use of SIMD.
2. Improved likelihood calculation speed for some models by caching how parameter changes are propagated to tree nodes.
3. Bug fixes.

2.5.46

1. Re-released with a hotfix for issue #1555
2. Speed improvements.
3. Restored auto-benchmarking under OpenMP
4. Fixed an issue with computing the likelihood function when an internal node is fixed at a given character (affected was, among other things, marginal ancestral state reconstruction)

2.5.45

Across the board 10-40% speed ups for core functions (esp codon models).

2.5.43

Bug fixes, minor feature additions.

2.5.42

-- Bug fixes, including internal errors on certain multi-partition optimization
-- Minor fixes to lib and code cleanup

2.5.41

-- Fix several RELAX.bf issues
-- Fix build issues when no OpenMP is present

2.5.40

Bug fixes and analysis enhancements

2.5.39

-- Optimization for BS-REL models
-- Bug and memory leak fixes
-- BUSTED v4.0