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DOI-USGS/toxEval
explore_endpoints not redirecting to website

It s difficult for me to determine if the error is due to something on my system or if the redirect option is experiencing issues. This is my first time trying to use the toxEval workflow. library(toxEval) ...
  • ccchatman
  • 8
  • Opened 
    on Aug 5, 2023
  • #405

DOI-USGS/toxEval
NOTICE: upcoming default branch name change

The master branch of this repository will soon be renamed from master to main, as part of a coordinated change across the USGS-R and USGS-VIZLAB organizations. This is part of a broader effort across the ...
  • jesse-ross
  • Opened 
    on Jan 20, 2022
  • #393

DOI-USGS/toxEval
More intuitive error if you forget ACC in get_chemical_summary

If you forget ACC and filtered_ep in get_chemical_summary, there should be a more intuitive error: chem_summary - get_chemical_summary(tox_list) Error in UseMethod( full_join ) : no applicable method ...
  • ldecicco-USGS
  • Opened 
    on Feb 2, 2021
  • #392

DOI-USGS/toxEval
Gene information not included in toxcast 3.3

https://github.com/USGS-R/toxEval/blob/6f3cf4feeec51b751582235c3c0943c148c7862e/R/toxEval.R#L124 Hey @ldecicco-USGS , I am looking at the end_point_info table associated with toxcast 3.3 I know you are ...
  • lukeloken
  • 1
  • Opened 
    on Nov 2, 2020
  • #388

DOI-USGS/toxEval
Rethink leaflet proxy

https://github.com/rstudio/leaflet/issues/590 (see WUReview for implemtation)
  • ldecicco-USGS
  • Opened 
    on Jul 12, 2020
  • #383

DOI-USGS/toxEval
New functions for next version

Two suggestions for new functions that will help vet chem/endpoints for potential exclusions. They will provide similar, but slightly different views of the same thing. 1. Scatter of ACC values for each ...
  • srcorsi-USGS
  • Opened 
    on May 7, 2020
  • #378

DOI-USGS/toxEval
Update to v3.2

  • ldecicco-USGS
  • Opened 
    on Feb 4, 2020
  • #371

DOI-USGS/toxEval
Put space between # endpoints and y axis

In barplots, the (chemical name?) and # endpoints are too bunched up on the left side of the plot.
  • limnoliver
  • 2
  • Opened 
    on Dec 3, 2019
  • #370

DOI-USGS/toxEval
Drop completely undetected compounds from heat map

In chemicals , the drop nondetects is not dropping compounds that are completely undetected (in all samples). Maybe should say and behave like, drop all compounds were never detected or something.
  • limnoliver
  • Opened 
    on Dec 3, 2019
  • #369

DOI-USGS/toxEval
Heat map of single site data does not work for single site

Maybe this is a faceting by group (lake) issue?
  • limnoliver
  • Opened 
    on Dec 3, 2019
  • #368
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