Updated eclipse references

Author: d-cameron

.classpath

@@ -1,8 +1,12 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <classpath>
- <classpathentry kind="src" path="src/java"/>
- <classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
- <classpathentry kind="lib" path="lib/testng/testng-5.5-jdk15.jar"/>
- <classpathentry kind="lib" path="lib/ant/bcel-5.2.jar"/>
- <classpathentry kind="output" path="bin"/>
+	<classpathentry kind="src" path="src/java"/>
+	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
+	<classpathentry kind="lib" path="lib/testng/testng-5.5-jdk15.jar"/>
+	<classpathentry kind="lib" path="lib/ant/bcel-5.2.jar"/>
+	<classpathentry kind="lib" path="lib/cofoja/cofoja-1.0-r139.jar"/>
+	<classpathentry kind="lib" path="lib/commons-jexl-2.1.1.jar"/>
+	<classpathentry kind="lib" path="lib/apache-ant-1.8.2-bzip2.jar"/>
+	<classpathentry kind="lib" path="lib/snappy-java-1.0.3-rc3.jar"/>
+	<classpathentry kind="output" path="bin"/>
 </classpath>

.gitignore

@@ -9,3 +9,4 @@ atlassian-ide-plugin.xml
 intellij.testclasses
 intellij.classes
 
+/bin

.project

@@ -1,17 +1,17 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <projectDescription>
- <name>picard</name>
- <comment></comment>
- <projects>
- </projects>
- <buildSpec>
- <buildCommand>
- <name>org.eclipse.jdt.core.javabuilder</name>
- <arguments>
- </arguments>
- </buildCommand>
- </buildSpec>
- <natures>
- <nature>org.eclipse.jdt.core.javanature</nature>
- </natures>
+	<name>htsjdk</name>
+	<comment></comment>
+	<projects>
+	</projects>
+	<buildSpec>
+		<buildCommand>
+			<name>org.eclipse.jdt.core.javabuilder</name>
+			<arguments>
+			</arguments>
+		</buildCommand>
+	</buildSpec>
+	<natures>
+		<nature>org.eclipse.jdt.core.javanature</nature>
+	</natures>
 </projectDescription>